BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005E08SP1|AL425388
(997 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1523 1790 0.0
>3x_Contig1523
Length = 10049
Score = 1790 bits (899), Expect = 0.0
Identities = 968/986 (98%), Gaps = 7/986 (0%)
Strand = Plus / Minus
Query: 1 gatcatatcatgattttttacatcaaaattggggataccttccaacattagcctttcaat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 gatcatatcatgattctttacatcaaaattggggataccttccaacattagcctttcaat 1376
Query: 61 atcgaatttggttaaagtgtcaacgatgaattccgccaaaactagcttgagtaaagtcca 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1375 atcgaatttggttaaagtgtcaacgttgaattccgccaaaactagcttgagtaaagtcca 1316
Query: 121 actacctccagaaattcctgctacatagctagtgcattcccagagtccgtgttgctgcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 actacctccagaaattcctgctacatagctagtgcattcccagagtccgtgttgctgcat 1256
Query: 181 acctaaaacgaaccctgaactgatgagcatagaacgaaacccaccaccagaaatggcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 acctaaaacgaaccctgaactgatgagcatagaacgaaacccaccaccagaaatggcaac 1196
Query: 241 agcaattcgtggaaactgaagactatcaacatttattccaggaatggctaggtcctcata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 agcaattcgtggaaactgaagactatcaacatttattccaggaatggctaggtcctcata 1136
Query: 301 gaacttctcgaatttccccttaatcacttcagttcgtttcgataaataatcaaattccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 gaacttctcgaatttccccttaatcacttcagttcgtttcgataaataatcaaattccaa 1076
Query: 361 tgcactcaatttttcattctggaattcttggtgttagtcgttaatcattttaaaacagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 tgcactcaatttttcattctggaattcttggtgttagtcgttaatcattttaaaacagcc 1016
Query: 421 attaaggctcggcggctattttgcgttacattaaaacttgtattttaaacatactttagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 attaaggctcggcggctattttgcgttacattaaaacttgtattttaaacatactttagc 956
Query: 481 agctcttaaactgaggtctttggggcagtcgacgttcacaggagcatataatgaggcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 agctcttaaactgaggtctttggggcagtcgacgttcacaggagcatataatgaggcaat 896
Query: 541 tgccacccttgttaaaataatcagcctcaaaaacaacattgtccgcatgggttatatcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tgccacccttgttaaaataatcagcctcaaaaacaacattgtccgcatgggttatatcgt 836
Query: 601 tcgaaacatttatttcgatatcttgatgataaaatatcaacacactttgaatggaaagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tcgaaacatttatttcgatatcttgatgataaaatatcaacacactttgaatggaaagaa 776
Query: 661 agaaggttggaattatttgaaaaatgatttttatcataaattaaaaggctgcgtctttat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 agaaggttggaattatttgaaaaatgatttttatcataaattaaaaggctgcgtctttat 716
Query: 721 agaatggaaacaaacagcactatataataatattmmmcagtacaaaggcgggataatatg 780
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 715 agaatggaaacaaacagcactatataataatattaaacagtacaaaggcgggataatatg 656
Query: 781 aaataaaaaamacactcttatggtgagaagggtc-aaatgtgcg-agattacacaggaag 838
|||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 655 aaataaaaaaaacactcttatggtgagaagggtcaaaatgtgcgaagattacacaggaag 596
Query: 839 atgcgattgctttactctgcacgtgaaagtatcgtttaaat-ctgagtdagcttataaat 897
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 595 atgcgattgctttactctgcacgtgaaagtatcgtttaaatcctgagtaagcttataaat 536
Query: 898 atatgcnatgaagggtag-ccgataattaawttagacgtgccat-cgccttgatgcataa 955
|||||| ||||||||||| ||||||||||| |||||||||| || ||||||||||||||
Sbjct: 535 atatgcaatgaagggtagcccgataattaaattagacgtgcaatccgccttgatgcatat 476
Query: 956 tgg-tttgagact-ctcgtcgaaagg 979
||| ||||||||| ||||||||||||
Sbjct: 475 tggttttgagactcctcgtcgaaagg 450
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7388
Number of Sequences: 1807
Number of extensions: 7388
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 997
length of database: 10,358,551
effective HSP length: 16
effective length of query: 981
effective length of database: 10,329,639
effective search space: 10133375859
effective search space used: 10133375859
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)